Berkeley Structural Genomics Center

BSGC Structure Table

This table contains a summary of all structures solved by the BSGC. The table is manually annotated by the experimentalists who solved the structure.

Target IDGI numberSequence annotationStructural annotationExperimental annotationReference
1011B/MP0361590900Ribonuclease HII (rnhB)Ribonuclease HII (rnhB)N/AStructure v8 p897 (2000)
1022B/MP5413258135Hypothetical proteinIntracellular proteinaseProtease PNAS v97 p14079 (2000)
1031B/MP3694982034Hypothetical proteinBinds or metabolize fatty acidN/AProteins v50 p526 (2003)
1038B=MPN621673883Hypothetical proteinPeroxiredoxinN/AJSFG v4 p31 (2003)
1055B1591412Fibrillarin HomologRNA methyltransferaseN/AEMBO J v19 p317 (2000)
1063B/MP3632983942Hypothetical proteinUnknown functionN/APNAS v99 p7980 (2002)
1070B-PO4/MP4141592204Phosphoserine phosphatase Phosphoserine phosphatase, Pi boundPhosphoserine phosphataseJMB v319 p421 (2002)
1070B-PLSsame as aboveSame as abovePhosphoserine phosphatase, Phosphoserine boundD11N mutant. Phosphoserine phosphatase inactivitedsame as above
1070B-BeFsame as aboveSame as abovePhosphoserine phosphatase, PhosphoAsp intermediate analogueN/APNAS v98 p8525 (2001)
1070B-AlFsame as aboveSame as abovePhosphoserine phosphatase, Transition state analogueN/AJMB v319 p421 (2002)
1070B-aposame as aboveSame as aboveSame as aboveD11N mutantStructure v9 p65 (2001)
1071B/MP5694981173Hypothetical proteinPhosphatasePhosphataseProteins Sci v12 p1464 (2003)
1072B/MP1631499712Hypothetical proteinMethyltransferaseMethyltransferaseJSFG v2 p121 (2002)
1080B-P21= MPN3141674217Hypothetical proteinUnknown function, DNA binding?Cell division regulator?Proteins v55 p785 (2004)
1080B-P212121same as aboveSame as aboveSame as aboveSame as abovesame as above
1080B-P4same as aboveSame as aboveSame as aboveSame as abovesame as above
1099B-P21/MP6734981391Riboflavin kinase/FMN adenylyltransferaseRiboflavin kinase/FMN adenylyltransferase, citrate boundN/AProtiens v52 p633 (2003)
1099B-Rflsame as aboveSame as aboveSame as above, Riboflavin complexN/AProteins v58 p246 (2005)
1099B-C2same as aboveSame as aboveSame as aboveN/AUnpublished
1102B/MP6774982355N utilization substance protein AN utilization substance protein AN/ABiochemistry v42 p13429 (2003)
1195B1591008Small Heat Shock ProteinSmall Heat Shock ProteinSmall Heat Shock ProteinNature v394 p595 (1998)
1196B1591029Thioredoxin (trx)Thioredoxin (trx)N/AProtein Sci v10 p384 (2001)
1197B1591284Hypothetical proteinATP binding proteinATP binding protein (ATP dependent molecular switch)PNAS v95 p15189 (1998)
1198B/MP1252826380Translation Initiation Factor 5ATranslation Initiation Factor 5AN/APNAS v95 p10419 (1998)
1199B/MPN1211591880Hypothetical proteinIsomerase3-Hexulose 6 phosphate isomeraseStructure v10 p195 (2002)
1200B3257413Pyrazinamidase/NicotinamidasePyrazinamidase/NicotinamidasePyrazinamidase/NicotinamidaseBiochemistry v40 p14166 (2001)
1201B1590963Hypothetical proteinATP binding proteinNovel Nucleotide triphosphataseNSB v6 p691 (1999)
1202B/MP1614982028Ribonuclease PAncestral (A)-type Ribonuclease P, similar to B-typeProtein component of ribonuclease P, binds to P RNA and the complex cleaves tRNA precursors at the 5'-endPNAS v100 p7497 (2003), Acta Cryst D v58 p1234 (2002)
1203B13361189Hypothetical proteinOxidoredox proteinN/AJSFG v2 p53 (2002)
1386B3256437Fibrillarin HomologRNA methyltransferaseN/AUnpublished
1005B/MPN1261499771Hypothetical proteinPhosphodiesterase or nucleasePhosphodiesteraseJBC v279 p31854 (2004)
1029B/MPN6251787757Osmotically inducible protein CPeroxiredoxinPeroxiredoxinActa Cry vD60 p903 (2004)
1070B/MP4141592204Phosphoserine phosphatase Phosphoserine phosphatase Phosphoserine phosphatase Unpublished
1073B/MPN3614981923Peptide releasing factor 1Peptide releasing factor 1N/AJMB v341 p227 (2004)
1108B/MPN5702983779Hypothetical proteinMatrix metalloprotease-likeN/AActa Cry vD59 p1219 (2003)
1109B/MPN6602983865TRNA guanine-N1 methyltransferaseMethyltransferaseN/AProteins v53 p326 (2003)
1167B/MPN3264982022Hypothetical proteinUnknown functionN/AUnpublished
1291B/MPN43016129733Glyceraldehyde-3-phosphate dehydrogenase AGlyceraldehyde-3-phosphate dehydrogenase A, Mes buffer boundGlyceraldehyde-3-phosphate dehydrogenase AUnpublished
1151B=MPN34816741795-formyl tetrahydrofolate cyclo-ligase (HI0858) homolog5-formyl tetrahydrofolate cyclo-ligase5-formyl tetrahydrofolate cyclo-ligaseProteins v56 p839 (2005)
1119B/MPN3496459028Hypothetical proteinPhosphataseCTP,CDP,UTP, and UDP phosphataseUnpublished
1172B=MPN0303844637Hypothetical proteinNusB-like N/AProteins v55 p1082 (2004)
1150B=MPN3491674178Hypothetical proteinPhosphataseN/AUnpublished
1100B/MPN1561674381Ribosome binding factor ARibosome binding factor AN/AJSFG v4 p23 (2003)
1292B15806048MutT/nudix family proteinGTPase and Ap4Aase Nudix type hydrolaseMg++ activated Nucleoside triphosphatase and dinucleoside polyphosphate pyrophosphataseJMB v339 p103 (2004); Mol. Microbiol. V39 p286 (2001)
1292B-Smsame as aboveSame as aboveSame as above, samarium(III) ion boundN/Asame as above
1292B-ATPsame as aboveSame as aboveSame as above,two ATPs & six magnesium ions same as above
1292B-GNPsame as aboveSame as aboveSame as above,phosphoaminophosphonic acid-guanylate ester & 2 magnesium ionsN/Asame as above
1099B-FMN/MP6734981391Riboflavin kinase/FMN adenylyltransferaseRiboflavin kinase/FMN adenylyltransferase,FMN, ADP, AMP boundN/AUnpublished
1099B-ADPsame as aboveRiboflavin kinase/FMN adenylyltransferaseRiboflavin kinase/FMN adenylyltransferase,ADP boundN/AUnpublished
1099B-riboflavinsame as aboveRiboflavin kinase/FMN adenylyltransferaseRiboflavin kinase/FMN adenylyltransferase,riboflavin boundN/AUnpublished
1005B-Ni/MPN1261499771Hypothetical proteinPhosphodiesterase, Ni boundPhosphodiesteraseJBC v279 p31854 (2004)
1005B-Mnsame as aboveHypothetical proteinPhosphodiesterase, Mn boundSame as abovesame as above
1323B/MPN48815674463NifU or ISCU protein familyIron-Sulfur cluster assembly proteinN/AUnpublished
1324B/MPN54715675108PhosphotransacetylasePhosphotransacetylasePhosphotransacetylaseProteins v55 p479 (2004)
1350B-ZN/MPN04716082162Hypothetical proteinNicotinate phosphoribosyltransferase, Hexamer,tris buffer, MPD, and zinc boundN/AUnpublished
1325B/MPN42415675166Putative DNA-binding proteinDNA binding, translationN/AActa Crys. vD60 p1266 (2004)
1387B16129919Hypothetical proteinZn binding protein, lipocalin-likeN/AUnpublished
1170B/MPN6084982311PhoU protein familyIron cluster binding proteinN/AUnpublished
1114B/MPN2672650718Hypothetical proteinNAD KinaseNAD kinaseUnpublished
1371B/MPN30121646405Hypothetical proteinDNA binding proteinWeak binding to Z-DNA or B-DNAUnpublished
1367B/MPN04718978276Hypothetical proteinType II phosphoribosyltransferase,HexamerN/AUnpublished
1105B-P43/MPN6082983430PhoU protein familyPhoU protein familyN/AUnpublished
1105B-P321105B-P32Same as aboveSame as aboveN/AUnpublished
1316B/MPN26715644479Hypothetical proteinNAD KinaseN/AUnpublished
1009B/MPN1244981384Heat shock operon repressor HrcAHeat shock operon repressor HrcAN/AUnpublished
1260B=MPN3301674200Hypothetical proteinUnknown functionN/AProteins v58 p504 (2005)
1347B/MPN42816080818PhosphotransacetylasePhosphotransacetylasePhosphotransacetylaseUnpublished
1347B-APsame as aboveSame as aboveSame as aboveSame as aboveUnpublished
1234B/MPN2494982294HypotheticalGDP binding protein, circularly permuted GTPaseN/APNAS v101 p13198 (2004)
1944B16128119Beta-carbonic anhydraseCarbonic anhydraseCarbonic anhydraseUnpublished
1279B/MPN5303844938Hypothetical proteinHypothetical proteinN/AUnpublished
1151B-ADP/MPN34816741795-formyl tetrahydrofolate cyclo-ligase (HI0858) homolog5-formyl tetrahydrofolate cyclo-ligase, ADP,Mg complex5-formyl tetrahydrofolate cyclo-ligaseUnpublished
1151B-FTHFsame as aboveSame as above5-formyl tetrahydrofolate cyclo-ligase, ADP,Mg,formyltertrahydrofolate complexSame as aboveUnpublished
1322B/MPN50715669898Type I restriction-modification enzyme, S subunitDNA binding proteinN/AUnpublished
1275B/MPN6772984174Hypothetical proteinPhosphodiesteraseN/AUnpublished
1350B-NA/MPN04716082162Hypothetical proteinNicotinate phosphoribosyltransferase, nicotinate mononucleotide boundN/AUnpublished
1350B-PRPPsame as aboveSame as aboveNicotinate phosphoribosyltransferase, phosphoribosylpyrophosphate boundN/AUnpublished
1350Bsame as aboveSame as aboveNicotinate phosphoribosyltransferase, nativeN/AUnpublished
1114B-NAD/MPN2672650718Hypothetical proteinNAD kinase, NAD boundN/AUnpublished
1114B-ATP2650718Same as aboveNAD kinase, ATP boundN/AUnpublished
1045B=MPN5551673958Hypothetical proteinBinds peptide or proteinN/AUnpublished
1945B1428542DsrEOxidoredoxin, heterohexamer with dsrF,dsrHN/AUnpublished
1946B8134410DsrFOxidoredoxin, heterohexamer with dsrE,dsrHN/AUnpublished
1947B3228384DsrHOxidoredoxin, heterohexamer with dsrE,dsrFN/AUnpublished
1068B=MPN4231674102Hypothetical proteinUnknown functionN/AUnpublished